Urgent: GCC - GTN presentations and workshop

classic Classic list List threaded Threaded
5 messages Options
Reply | Threaded
Open this post in threaded view
|

Urgent: GCC - GTN presentations and workshop

Björn Grüning
Hi GTN!

Today is the deadline to hand-in workshop proposals. Sorry for the late
notice. We were thinking of handing in a session about:

* GTN github repo + template
* Galaxy tours
* Best-practices
* Some kind of train the trainer
* Galaxy-Hub ?

A mixture or only parts of it, not sure.
Do you think we should do this? Other ideas?

What about a Galaxy GTN talk?

Please let me know what you think,
Bjoern
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: Urgent: GCC - GTN presentations and workshop

Pratik Jagtap
Hello Bjoern,

 A training session on Galaxy Tours will be great. We have started using it to demonstrate the use of dataset collection for proteomics and short proteogenomics workflows. It is a lot of work - but results are worth it.

Regards,
Pratik

Pratik Jagtap, 

Research Assistant Professor, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota.

Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455

Phone: 612-624-0381    Email: [hidden email]   

Using Galaxy for Proteomics




On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning <[hidden email]> wrote:
Hi GTN!

Today is the deadline to hand-in workshop proposals. Sorry for the late
notice. We were thinking of handing in a session about:

* GTN github repo + template
* Galaxy tours
* Best-practices
* Some kind of train the trainer
* Galaxy-Hub ?

A mixture or only parts of it, not sure.
Do you think we should do this? Other ideas?

What about a Galaxy GTN talk?

Please let me know what you think,
Bjoern
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: [SPAM][M] Re: Urgent: GCC - GTN presentations and workshop

Doyle Maria
Hi Bjoern,

If it's not too late to add an opinion - I agree with Pratik that a session on Galaxy Tours would be great and if possible I think it would also be great to include something on the GTN github, so that people could learn a bit about the training material that's available and how they can contribute if they want. Maybe then any relevant best practices for how to use and/or contribute to the training material could be included in that? And in my opinion it could be considered a form of Train-the-Trainer as it would help trainers learn about material that they can use in their trainings.

I also think a GTN talk would be good to include if there's a slot, as it would probably be good to give people an update on where things are at and future plans. And I think GCC2017 could be an excellent time to get feedback/input from people in the room on what they think e.g if there are things they think should be changed, improved, what new topics could be added, or what the prioritites should be. If you and others agree maybe that could happen at the workshop, after the talk or during a birds-of-a-feather.

Cheers!

Maria

Maria Doyle
Application and Training Specialist
Research Computing Facility


[http://i.imgur.com/tG0nMXg.jpg]

305 Grattan Street
Melbourne, Victoria
3000 Australia

From: Galaxy-training <[hidden email]<mailto:[hidden email]>> on behalf of Pratik Jagtap <[hidden email]<mailto:[hidden email]>>
Date: Saturday, 21 January 2017 at 3:20 AM
To: Björn Grüning <[hidden email]<mailto:[hidden email]>>
Cc: Galaxy-Training List <[hidden email]<mailto:[hidden email]>>, Dannon Baker <[hidden email]<mailto:[hidden email]>>
Subject: [SPAM][M] Re: [gxy-train] Urgent: GCC - GTN presentations and workshop

Hello Bjoern,

 A training session on Galaxy Tours will be great. We have started using it to demonstrate the use of dataset collection for proteomics and short proteogenomics workflows. It is a lot of work - but results are worth it.

Regards,
Pratik


Pratik Jagtap,

Research Assistant Professor, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota.

Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455

Phone: 612-624-0381<http://612-624-0381/>    Email: [hidden email]<mailto:[hidden email]>

Using Galaxy for Proteomics<http://z.umn.edu/galaxypchapter>



On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning <[hidden email]<mailto:[hidden email]>> wrote:
Hi GTN!

Today is the deadline to hand-in workshop proposals. Sorry for the late
notice. We were thinking of handing in a session about:

* GTN github repo + template
* Galaxy tours
* Best-practices
* Some kind of train the trainer
* Galaxy-Hub ?

A mixture or only parts of it, not sure.
Do you think we should do this? Other ideas?

What about a Galaxy GTN talk?

Please let me know what you think,
Bjoern
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/


This email (including any attachments or links) may contain
confidential and/or legally privileged information and is
intended only to be read or used by the addressee.  If you
are not the intended addressee, any use, distribution,
disclosure or copying of this email is strictly
prohibited.  
Confidentiality and legal privilege attached to this email
(including any attachments) are not waived or lost by
reason of its mistaken delivery to you.
If you have received this email in error, please delete it
and notify us immediately by telephone or email.  Peter
MacCallum Cancer Centre provides no guarantee that this
transmission is free of virus or that it has not been
intercepted or altered and will not be liable for any delay
in its receipt.

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: [SPAM][M] Re: Urgent: GCC - GTN presentations and workshop

Björn Grüning
Hi Maria,

I handed some poorly written proposal in. Let's hope the best!

I also think the network should apply for a talk, any volunteer? :)

Thanks for you kind words,
Bjoern


Am 24.01.2017 um 00:34 schrieb Doyle Maria:

> Hi Bjoern,
>
> If it's not too late to add an opinion - I agree with Pratik that a
> session on Galaxy Tours would be great and if possible I think it
> would also be great to include something on the GTN github, so that
> people could learn a bit about the training material that's available
> and how they can contribute if they want. Maybe then any relevant
> best practices for how to use and/or contribute to the training
> material could be included in that? And in my opinion it could be
> considered a form of Train-the-Trainer as it would help trainers
> learn about material that they can use in their trainings.
>
> I also think a GTN talk would be good to include if there's a slot,
> as it would probably be good to give people an update on where things
> are at and future plans. And I think GCC2017 could be an excellent
> time to get feedback/input from people in the room on what they think
> e.g if there are things they think should be changed, improved, what
> new topics could be added, or what the prioritites should be. If you
> and others agree maybe that could happen at the workshop, after the
> talk or during a birds-of-a-feather.
>
> Cheers!
>
> Maria
>
> Maria Doyle Application and Training Specialist Research Computing
> Facility
>
>
> [http://i.imgur.com/tG0nMXg.jpg]
>
> 305 Grattan Street Melbourne, Victoria 3000 Australia
>
> From: Galaxy-training
> <[hidden email]<mailto:[hidden email]>>
> on behalf of Pratik Jagtap <[hidden email]<mailto:[hidden email]>>
> Date: Saturday, 21 January 2017 at 3:20 AM To: Björn Grüning
> <[hidden email]<mailto:[hidden email]>> Cc:
> Galaxy-Training List
> <[hidden email]<mailto:[hidden email]>>,
> Dannon Baker <[hidden email]<mailto:[hidden email]>>
> Subject: [SPAM][M] Re: [gxy-train] Urgent: GCC - GTN presentations
> and workshop
>
> Hello Bjoern,
>
> A training session on Galaxy Tours will be great. We have started
> using it to demonstrate the use of dataset collection for proteomics
> and short proteogenomics workflows. It is a lot of work - but results
> are worth it.
>
> Regards, Pratik
>
>
> Pratik Jagtap,
>
> Research Assistant Professor, Department of Biochemistry, Molecular
> Biology and Biophysics, University of Minnesota.
>
> Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455
>
> Phone: 612-624-0381<http://612-624-0381/>    Email:
> [hidden email]<mailto:[hidden email]>
>
> Using Galaxy for Proteomics<http://z.umn.edu/galaxypchapter>
>
>
>
> On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning
> <[hidden email]<mailto:[hidden email]>> wrote:
> Hi GTN!
>
> Today is the deadline to hand-in workshop proposals. Sorry for the
> late notice. We were thinking of handing in a session about:
>
> * GTN github repo + template * Galaxy tours * Best-practices * Some
> kind of train the trainer * Galaxy-Hub ?
>
> A mixture or only parts of it, not sure. Do you think we should do
> this? Other ideas?
>
> What about a Galaxy GTN talk?
>
> Please let me know what you think, Bjoern
> ___________________________________________________________ Please
> keep all replies on the list by using "reply all" in your mail
> client.  To manage your subscriptions to this and other Galaxy lists,
> please use the interface at: https://lists.galaxyproject.org/
>
> To search Galaxy mailing lists use the unified search at:
> http://galaxyproject.org/search/mailinglists/
>
>
> This email (including any attachments or links) may contain
> confidential and/or legally privileged information and is intended
> only to be read or used by the addressee.  If you are not the
> intended addressee, any use, distribution, disclosure or copying of
> this email is strictly prohibited. Confidentiality and legal
> privilege attached to this email (including any attachments) are not
> waived or lost by reason of its mistaken delivery to you. If you have
> received this email in error, please delete it and notify us
> immediately by telephone or email.  Peter MacCallum Cancer Centre
> provides no guarantee that this transmission is free of virus or that
> it has not been intercepted or altered and will not be liable for any
> delay in its receipt.
>
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/
Reply | Threaded
Open this post in threaded view
|

Re: [SPAM][M] Re: Urgent: GCC - GTN presentations and workshop

Doyle Maria
Hi Bjoern,

That¹s great!

I¹m not sure if I can get to GCC2017 yet but if I can I¹ll be happy to
volunteer.

Cheers,

Maria

Maria Doyle
Application and Training Specialist
Research Computing Facility




305 Grattan Street
Melbourne, Victoria
3000 Australia






On 25/01/2017, 10:03 AM, "Björn Grüning" <[hidden email]> wrote:

>Hi Maria,
>
>I handed some poorly written proposal in. Let's hope the best!
>
>I also think the network should apply for a talk, any volunteer? :)
>
>Thanks for you kind words,
>Bjoern
>
>
>Am 24.01.2017 um 00:34 schrieb Doyle Maria:
>> Hi Bjoern,
>>
>> If it's not too late to add an opinion - I agree with Pratik that a
>> session on Galaxy Tours would be great and if possible I think it
>> would also be great to include something on the GTN github, so that
>> people could learn a bit about the training material that's available
>> and how they can contribute if they want. Maybe then any relevant
>> best practices for how to use and/or contribute to the training
>> material could be included in that? And in my opinion it could be
>> considered a form of Train-the-Trainer as it would help trainers
>> learn about material that they can use in their trainings.
>>
>> I also think a GTN talk would be good to include if there's a slot,
>> as it would probably be good to give people an update on where things
>> are at and future plans. And I think GCC2017 could be an excellent
>> time to get feedback/input from people in the room on what they think
>> e.g if there are things they think should be changed, improved, what
>> new topics could be added, or what the prioritites should be. If you
>> and others agree maybe that could happen at the workshop, after the
>> talk or during a birds-of-a-feather.
>>
>> Cheers!
>>
>> Maria
>>
>> Maria Doyle Application and Training Specialist Research Computing
>> Facility
>>
>>
>> [http://i.imgur.com/tG0nMXg.jpg]
>>
>> 305 Grattan Street Melbourne, Victoria 3000 Australia
>>
>> From: Galaxy-training
>>
>><[hidden email]<mailto:galaxy-training-b
>>[hidden email]>>
>> on behalf of Pratik Jagtap <[hidden email]<mailto:[hidden email]>>
>> Date: Saturday, 21 January 2017 at 3:20 AM To: Björn Grüning
>> <[hidden email]<mailto:[hidden email]>> Cc:
>> Galaxy-Training List
>>
>><[hidden email]<mailto:[hidden email]
>>axyproject.org>>,
>> Dannon Baker <[hidden email]<mailto:[hidden email]>>
>> Subject: [SPAM][M] Re: [gxy-train] Urgent: GCC - GTN presentations
>> and workshop
>>
>> Hello Bjoern,
>>
>> A training session on Galaxy Tours will be great. We have started
>> using it to demonstrate the use of dataset collection for proteomics
>> and short proteogenomics workflows. It is a lot of work - but results
>> are worth it.
>>
>> Regards, Pratik
>>
>>
>> Pratik Jagtap,
>>
>> Research Assistant Professor, Department of Biochemistry, Molecular
>> Biology and Biophysics, University of Minnesota.
>>
>> Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455
>>
>> Phone: 612-624-0381<http://612-624-0381/>    Email:
>> [hidden email]<mailto:[hidden email]>
>>
>> Using Galaxy for Proteomics<http://z.umn.edu/galaxypchapter>
>>
>>
>>
>> On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning
>> <[hidden email]<mailto:[hidden email]>> wrote:
>> Hi GTN!
>>
>> Today is the deadline to hand-in workshop proposals. Sorry for the
>> late notice. We were thinking of handing in a session about:
>>
>> * GTN github repo + template * Galaxy tours * Best-practices * Some
>> kind of train the trainer * Galaxy-Hub ?
>>
>> A mixture or only parts of it, not sure. Do you think we should do
>> this? Other ideas?
>>
>> What about a Galaxy GTN talk?
>>
>> Please let me know what you think, Bjoern
>> ___________________________________________________________ Please
>> keep all replies on the list by using "reply all" in your mail
>> client.  To manage your subscriptions to this and other Galaxy lists,
>> please use the interface at: https://lists.galaxyproject.org/
>>
>> To search Galaxy mailing lists use the unified search at:
>> http://galaxyproject.org/search/mailinglists/
>>
>>
>> This email (including any attachments or links) may contain
>> confidential and/or legally privileged information and is intended
>> only to be read or used by the addressee.  If you are not the
>> intended addressee, any use, distribution, disclosure or copying of
>> this email is strictly prohibited. Confidentiality and legal
>> privilege attached to this email (including any attachments) are not
>> waived or lost by reason of its mistaken delivery to you. If you have
>> received this email in error, please delete it and notify us
>> immediately by telephone or email.  Peter MacCallum Cancer Centre
>> provides no guarantee that this transmission is free of virus or that
>> it has not been intercepted or altered and will not be liable for any
>> delay in its receipt.
>>


This email (including any attachments or links) may contain
confidential and/or legally privileged information and is
intended only to be read or used by the addressee.  If you
are not the intended addressee, any use, distribution,
disclosure or copying of this email is strictly
prohibited.  
Confidentiality and legal privilege attached to this email
(including any attachments) are not waived or lost by
reason of its mistaken delivery to you.
If you have received this email in error, please delete it
and notify us immediately by telephone or email.  Peter
MacCallum Cancer Centre provides no guarantee that this
transmission is free of virus or that it has not been
intercepted or altered and will not be liable for any delay
in its receipt.

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/